Species:

Escherichia coli (strain K12) (83333)

Expansion Algorithm: Genes as group

Link/Direction min confidence: 0.5/1.0

Genes/Links: 16/112

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Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.988
Operon
0.852
Metabolic

0.969
Operon
0.857
Metabolic

0.982
Operon
0.872
Metabolic

0.981
PPI
0.818
Metabolic

0.978
PPI
0.773
Metabolic

0.891
PPI
0.753
Metabolic

0.972
PPI
0.844
Metabolic

0.959
Operon
0.847
Metabolic

0.973
Operon
0.916
Metabolic

0.907
Operon
0.844
Metabolic

0.975
PPI
0.89
Metabolic

0.927
PPI
0.754
Metabolic

0.964
PPI
0.664
Metabolic

0.925
Operon
0.825
Metabolic

0.953
PPI
0.84
Metabolic

Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.978
Operon
0.972
Metabolic

0.979
Metabolic
0.877
Operon

0.972
Metabolic
0.958
Operon

0.913
Operon
0.746
Metabolic

0.978
Metabolic
0.961
Operon

0.983
Operon
0.955
Metabolic

0.985
Operon
0.975
Metabolic

0.919
Operon
0.914
Metabolic

0.982
Operon
0.872
Metabolic

0.967
Metabolic
0.876
PPI

0.844
Metabolic
0.519
Operon

0.9
Metabolic
0.883
PPI

0.944
PPI
0.753
Metabolic

0.882
Operon
0.824
Metabolic

0.878
PPI
0.843
Operon

0.993
Operon
0.96
Metabolic

0.993
Operon
0.977
Metabolic

0.985
Operon
0.975
Metabolic

0.956
Metabolic
0.933
PPI

0.989
PPI
0.902
Metabolic

0.968
Operon
0.95
Metabolic

0.938
Metabolic
0.811
Operon

0.974
Operon
0.936
Metabolic

0.972
PPI
0.844
Metabolic

0.977
PPI
0.942
Metabolic

0.768
Metabolic
0.672
Operon

0.931
Operon
0.911
Metabolic

0.933
PPI
0.732
Metabolic

0.883
Metabolic
0.802
Operon

0.915
Metabolic
0.91
Operon

0.978
PPI
0.773
Metabolic

0.967
Operon
0.811
Metabolic

0.944
PPI
0.753
Metabolic

0.936
PPI
0.696
Metabolic

0.933
PPI
0.732
Metabolic

0.89
PPI
0.761
Metabolic

0.849
PPI
0.752
Metabolic

0.915
PPI
0.756
Metabolic

0.833
PPI
0.734
Metabolic

0.849
PPI
0.688
Metabolic

0.85
PPI
0.735
Metabolic

0.873
PPI
0.764
Metabolic

0.983
PPI
0.851
Metabolic

0.974
Operon
0.936
Metabolic

0.844
Metabolic
0.519
Operon

0.927
PPI
0.754
Metabolic

0.968
PPI
0.912
Metabolic

0.968
Operon
0.911
Metabolic

0.788
Operon
0.757
Metabolic

0.938
Operon
0.918
Metabolic

0.843
Operon
0.746
Metabolic

0.859
Metabolic
0.806
Operon

0.859
Operon
0.831
Metabolic

0.938
Operon
0.756
Metabolic

0.751
Metabolic
0.519
Operon

0.993
Operon
0.974
Metabolic

0.985
Operon
0.948
Metabolic

0.979
Metabolic
0.877
Operon

0.974
Operon
0.97
Metabolic

0.987
Operon
0.971
Metabolic

0.993
PPI
0.971
Metabolic

0.971
PPI
0.939
Metabolic

0.96
PPI
0.947
Metabolic

0.938
Metabolic
0.811
Operon

0.894
Operon
0.775
Metabolic

0.907
Operon
0.844
Metabolic

0.859
Metabolic
0.806
Operon

0.895
Metabolic
0.71
Operon

0.873
PPI
0.764
Metabolic

0.786
Metabolic
0.519
Operon
0.504
PPI

0.989
Operon
0.833
Metabolic

0.971
PPI
0.939
Metabolic

0.956
Metabolic
0.933
PPI

0.974
Operon
0.872
Metabolic

0.979
Operon
0.832
Metabolic

0.981
PPI
0.818
Metabolic

0.961
Operon
0.916
Metabolic

0.843
Operon
0.746
Metabolic

0.834
Operon
0.804
Metabolic

0.932
Operon
0.877
Metabolic

0.884
Metabolic
0.865
PPI

0.882
Operon
0.824
Metabolic

0.849
PPI
0.688
Metabolic

0.993
PPI
0.971
Metabolic

0.993
PPI
0.933
Metabolic

0.919
Operon
0.914
Metabolic

0.953
Operon
0.829
Metabolic

0.951
Operon
0.827
Metabolic

0.989
PPI
0.966
Metabolic

0.977
PPI
0.942
Metabolic

0.962
PPI
0.924
Metabolic

0.925
Operon
0.825
Metabolic

0.95
PPI
0.897
Metabolic

0.961
Operon
0.916
Metabolic

0.912
Operon
0.855
Metabolic

0.938
Operon
0.756
Metabolic

0.927
Metabolic
0.844
PPI

0.833
PPI
0.734
Metabolic

0.989
PPI
0.902
Metabolic

0.973
Operon
0.916
Metabolic

0.914
Operon
0.815
Metabolic

0.9
Metabolic
0.883
PPI

0.963
Operon
0.945
Metabolic

0.761
Operon
0.743
Metabolic

0.912
Operon
0.855
Metabolic

0.843
Metabolic
0.78
Operon

0.867
PPI
0.843
Metabolic

0.755
Operon
0.621
Metabolic

0.879
PPI
0.793
Metabolic

0.786
Metabolic
0.519
Operon
0.504
PPI

0.978
Operon
0.972
Metabolic

0.993
Operon
0.974
Metabolic

0.991
Operon
0.98
Metabolic

0.993
Operon
0.96
Metabolic

0.989
PPI
0.968
Metabolic

0.947
Metabolic
0.65
Operon

0.95
Operon
0.908
Metabolic

0.895
Operon
0.757
Metabolic

0.953
PPI
0.84
Metabolic

0.963
Operon
0.945
Metabolic

0.95
PPI
0.897
Metabolic

0.956
Metabolic
0.952
PPI

0.938
Operon
0.918
Metabolic

0.834
Operon
0.804
Metabolic

0.89
PPI
0.761
Metabolic

0.985
Operon
0.948
Metabolic

0.959
Operon
0.939
Metabolic

0.983
Operon
0.955
Metabolic

0.983
Operon
0.873
Metabolic

0.989
PPI
0.968
Metabolic

0.951
Operon
0.827
Metabolic

0.965
Operon
0.939
Metabolic

0.969
Operon
0.857
Metabolic

0.931
Operon
0.911
Metabolic

0.967
Operon
0.811
Metabolic

0.859
Operon
0.831
Metabolic

0.867
PPI
0.843
Metabolic

0.864
PPI
0.781
Metabolic

0.891
PPI
0.753
Metabolic

0.95
Operon
0.908
Metabolic

0.895
Metabolic
0.71
Operon

0.927
Metabolic
0.844
PPI

0.905
Metabolic
0.9
Operon

0.751
Metabolic
0.519
Operon

0.884
Metabolic
0.865
PPI

0.915
Metabolic
0.91
Operon

0.878
PPI
0.843
Operon

0.755
Operon
0.621
Metabolic

0.869
PPI
0.755
Operon

0.869
Operon
0.828
PPI

0.991
Operon
0.98
Metabolic

0.972
Metabolic
0.958
Operon

0.987
Operon
0.971
Metabolic

0.993
PPI
0.933
Metabolic

0.99
Operon
0.97
Metabolic

0.968
Operon
0.95
Metabolic

0.965
Operon
0.939
Metabolic

0.945
PPI
0.928
Metabolic

0.964
Operon
0.822
Metabolic

0.975
PPI
0.89
Metabolic

0.968
PPI
0.912
Metabolic

0.932
Operon
0.877
Metabolic

0.905
Metabolic
0.9
Operon

0.85
PPI
0.735
Metabolic

0.879
PPI
0.793
Metabolic

0.96
PPI
0.947
Metabolic

0.885
Operon
0.573
Metabolic

0.979
Operon
0.832
Metabolic

0.945
PPI
0.928
Metabolic

0.967
Metabolic
0.876
PPI

0.914
Operon
0.815
Metabolic

0.962
PPI
0.924
Metabolic

0.964
PPI
0.664
Metabolic

0.97
PPI
0.934
Metabolic

0.788
Operon
0.757
Metabolic

0.956
Metabolic
0.952
PPI

0.849
PPI
0.752
Metabolic

0.883
Metabolic
0.802
Operon

0.864
PPI
0.781
Metabolic

0.869
Operon
0.828
PPI

0.913
Operon
0.746
Metabolic

0.989
Operon
0.833
Metabolic

0.865
Operon
0.777
Metabolic

0.983
Operon
0.873
Metabolic

0.953
Operon
0.829
Metabolic

0.885
Operon
0.573
Metabolic

0.983
PPI
0.851
Metabolic

0.988
Operon
0.852
Metabolic

0.964
Operon
0.822
Metabolic

0.894
Operon
0.775
Metabolic

0.895
Operon
0.757
Metabolic

0.768
Metabolic
0.672
Operon

0.761
Operon
0.743
Metabolic

0.936
PPI
0.696
Metabolic

0.959
Operon
0.939
Metabolic

0.974
Operon
0.97
Metabolic

0.993
Operon
0.977
Metabolic

0.978
Metabolic
0.961
Operon

0.865
Operon
0.777
Metabolic

0.99
Operon
0.97
Metabolic

0.989
PPI
0.966
Metabolic

0.974
Operon
0.872
Metabolic

0.959
Operon
0.847
Metabolic

0.947
Metabolic
0.65
Operon

0.97
PPI
0.934
Metabolic

0.968
Operon
0.911
Metabolic

0.843
Metabolic
0.78
Operon

0.915
PPI
0.756
Metabolic

0.869
PPI
0.755
Operon

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
pepN AMPN_ECOLI Aminopeptidase N P04825 b0932 947253 15 of 501 00480, 01100

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
pgi G6PI_ECOLI Glucose-6-phosphate isomerase P0A6T1 b4025 75169478 15 of 816 00010, 00030, 00500, 00520, 01100, 01110, 01120, 01200, 01250
ptrB PTRB_ECOLI Protease 2 P24555 b1845 946358 15 of 614
radA RADA_ECOLI DNA repair protein RadA P24554 b4389 948912 12 of 447
rluC RLUC_ECOLI Ribosomal large subunit pseudouridine synthase C P0AA39 b1086 66670648 13 of 683
fabG FABG_ECOLI 3-oxoacyl-[acyl-carrier-protein] reductase FabG P0AEK2 b1093 66670641 15 of 914 00061, 00780, 01100, 01110, 01212, 01240
gloB GLO2_ECOLI Hydroxyacylglutathione hydrolase GloB P0AC84 b0212 944902 13 of 694 00620, 01100
ybeM YBEM_ECOLI Putative protein YbeM P0DP64 BAA35269 P0DP64 15 of 591
glpD GLPD_ECOLI Aerobic glycerol-3-phosphate dehydrogenase P13035 b3426 947934 12 of 748 00564, 01110
metG SYM_ECOLI Methionine--tRNA ligase P00959 b2114 946643 15 of 892 00450, 00970, 01100
hisD HISX_ECOLI Histidinol dehydrogenase P06988 b2020 66674082 13 of 813 00340, 01100, 01110, 01230
msrB MSRB_ECOLI Peptide methionine sulfoxide reductase MsrB P0A746 b1778 58462326 12 of 721
sseA THTM_ECOLI 3-mercaptopyruvate sulfurtransferase P31142 b2521 66673591 15 of 810 00270, 00920, 01100, 01120, 04122
ydiQ YDIQ_ECOLI Putative electron transfer flavoprotein subunit YdiQ P76201 b1697 75203554 15 of 731
selO SELO_ECOLI Protein adenylyltransferase SelO P77649 b1706 946219 14 of 713
gloA LGUL_ECOLI Lactoylglutathione lyase P0AC81 b1651 66674457 15 of 788 00620, 01100

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