Species:

Escherichia coli (strain K12) (83333)

Expansion Algorithm: Genes as group

Link/Direction min confidence: 0.5/1.0

Genes/Links: 16/35

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Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.85
PPI
0.688
Metabolic

0.926
Operon
0.804
Metabolic

0.897
PPI
0.66
Metabolic

0.542
Metabolic
0.5
PPI

0.597
PPI
0.542
Metabolic

0.552
Metabolic
0.5
PPI

0.867
PPI
0.627
Metabolic

0.542
Metabolic
0.5
PPI

0.583
Metabolic
0.5
PPI

0.542
Metabolic
0.507
PPI

0.542
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

0.62
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.976
Operon
0.852
Metabolic

0.922
Operon
0.9
Metabolic
0.9
Complex

0.955
Operon
0.769
Metabolic

0.938
Operon
0.889
Metabolic

0.85
Operon
0.839
Metabolic

0.854
Operon
0.77
Metabolic

0.542
Metabolic
0.507
PPI

0.542
Metabolic
0.5
PPI

0.666
Metabolic
0.658
PPI

0.583
Metabolic
0.5
PPI

0.666
Metabolic
0.658
PPI

0.597
PPI
0.542
Metabolic

0.764
Metabolic
0.688
Operon

0.926
Operon
0.804
Metabolic

0.764
Metabolic
0.688
Operon

0.552
Metabolic
0.5
PPI

0.973
PPI
0.844
Metabolic

0.945
Operon
0.87
Metabolic

0.938
Operon
0.889
Metabolic

0.834
Operon
0.827
Metabolic

0.864
Operon
0.749
Metabolic

0.886
Operon
0.722
Metabolic

0.542
Metabolic
0.5
PPI

0.852
Metabolic
0.85
PPI

0.821
Operon
0.8
Metabolic

0.854
Operon
0.77
Metabolic

0.864
Operon
0.749
Metabolic

0.542
Metabolic
0.5
PPI

0.973
PPI
0.844
Metabolic

0.85
PPI
0.688
Metabolic

0.955
Operon
0.769
Metabolic

0.906
Operon
0.806
Metabolic

0.849
Operon
0.752
Metabolic

0.805
Operon
0.721
Metabolic

0.98
PPI
0.852
Metabolic

0.922
Operon
0.9
Metabolic
0.9
Complex

0.945
Operon
0.87
Metabolic

0.821
Operon
0.8
Metabolic

0.542
Metabolic
0.5
PPI

0.849
Operon
0.752
Metabolic

0.867
PPI
0.627
Metabolic

0.542
Metabolic
0.5
PPI

0.852
Metabolic
0.85
PPI

0.85
Operon
0.839
Metabolic

0.91
PPI
0.698
Metabolic

0.834
Operon
0.827
Metabolic

0.542
Metabolic
0.5
PPI

0.805
Operon
0.721
Metabolic

0.62
Metabolic
0.5
PPI

0.98
PPI
0.852
Metabolic

0.976
Operon
0.852
Metabolic

0.91
PPI
0.698
Metabolic

0.897
PPI
0.66
Metabolic

0.906
Operon
0.806
Metabolic

0.886
Operon
0.722
Metabolic

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
slmA SLMA_ECOLI Nucleoid occlusion factor SlmA P0C093 b3641 66672464 15 of 29

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
glmU GLMU_ECOLI Bifunctional protein GlmU P0ACC7 b3730 66672366 7 of 673 00520, 00541, 01100, 01250
yjeH YJEH_ECOLI L-methionine/branched-chain amino acid exporter YjeH P39277 b4141 66671947 1 of 57
cmoB CMOB_ECOLI tRNA U34 carboxymethyltransferase P76291 b1871 58462338 2 of 30
trmA TRMA_ECOLI tRNA/tmRNA (uracil-C(5))-methyltransferase P23003 b3965 66672123 3 of 116
rdgC RDGC_ECOLI Recombination-associated protein RdgC P36767 b0393 66671307 2 of 146
yfdC YFDC_ECOLI Inner membrane protein YfdC P37327 b2347 944801 1 of 34
gph GPH_ECOLI Phosphoglycolate phosphatase P32662 b3385 947895 7 of 585 00630, 01100, 01110
dut DUT_ECOLI Deoxyuridine 5'-triphosphate nucleotidohydrolase P06968 b3640 948607 5 of 663 00240, 01100, 01232
ftsZ FTSZ_ECOLI Cell division protein FtsZ P0A9A6 b0095 66671615 6 of 713
glmM GLMM_ECOLI Phosphoglucosamine mutase P31120 b3176 66672922 6 of 581 00520, 01100, 01250
nudJ NUDJ_ECOLI Phosphatase NudJ P0AEI6 b1134 66670599 1 of 38 00740
ybbP YBBP_ECOLI Uncharacterized ABC transporter permease YbbP P77504 b0496 945118 1 of 248
rimK RIMK_ECOLI Ribosomal protein S6--L-glutamate ligase P0C0U4 b0852 58460667 6 of 305
ygjK YGJK_ECOLI Glucosidase YgjK P42592 b3080 947596 1 of 193
rsmD RSMD_ECOLI Ribosomal RNA small subunit methyltransferase D P0ADX9 b3465 66672651 6 of 459

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