Species:

Escherichia coli (strain K12) (83333)

Expansion Algorithm: Genes as group

Link/Direction min confidence: 0.5/1.0

Genes/Links: 16/35

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Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.838
PPI
0.61
Metabolic

0.928
PPI
0.738
Metabolic

0.542
Metabolic
0.5
PPI

0.582
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

0.552
Metabolic
0.526
PPI

0.856
PPI
0.686
Metabolic

0.9
Metabolic
0.519
Operon
0.5
PPI

0.9
Operon
0.629
Metabolic
0.593
PPI

0.832
Metabolic
0.739
Operon

0.9
Operon
0.668
Metabolic
0.5
PPI

0.685
Metabolic
0.588
PPI

0.545
Metabolic
0.5
PPI

0.834
PPI
0.592
Metabolic

0.834
PPI
0.592
Metabolic

Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.993
Operon
0.97
Metabolic
0.95
Complex

0.99
Operon
0.95
Metabolic
0.95
Complex

0.9
Operon
0.668
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

0.876
PPI
0.586
Metabolic

0.542
Metabolic
0.519
Operon
0.5
PPI

0.832
Metabolic
0.739
Operon

0.872
PPI
0.67
Metabolic

0.542
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

0.834
PPI
0.592
Metabolic

0.791
PPI
0.592
Metabolic

0.545
Metabolic
0.5
PPI

0.834
PPI
0.592
Metabolic

0.834
PPI
0.592
Metabolic

0.834
PPI
0.592
Metabolic

0.803
PPI
0.588
Metabolic

0.793
PPI
0.587
Metabolic

0.9
Metabolic
0.519
Operon
0.5
PPI

0.542
Metabolic
0.519
Operon
0.5
PPI

0.948
PPI
0.592
Metabolic

0.876
PPI
0.586
Metabolic

0.834
PPI
0.592
Metabolic

0.834
PPI
0.592
Metabolic

0.854
PPI
0.588
Metabolic

0.791
PPI
0.592
Metabolic

0.91
Operon
0.797
Metabolic

0.552
Metabolic
0.526
PPI

0.958
PPI
0.752
Metabolic

0.948
PPI
0.592
Metabolic

0.928
PPI
0.738
Metabolic

0.872
PPI
0.67
Metabolic

0.82
PPI
0.675
Metabolic

0.793
PPI
0.587
Metabolic

0.91
Operon
0.797
Metabolic

0.582
Metabolic
0.5
PPI

0.858
PPI
0.688
Metabolic

0.542
Metabolic
0.5
PPI

0.958
PPI
0.752
Metabolic

0.838
PPI
0.61
Metabolic

0.917
PPI
0.697
Metabolic

0.542
Metabolic
0.5
PPI

0.854
PPI
0.588
Metabolic

0.993
Operon
0.97
Metabolic
0.95
Complex

0.993
Operon
0.95
Metabolic
0.95
Complex

0.685
Metabolic
0.588
PPI

0.993
Operon
0.95
Metabolic
0.95
Complex

0.99
Operon
0.95
Metabolic
0.95
Complex

0.9
Operon
0.629
Metabolic
0.593
PPI

0.542
Metabolic
0.5
PPI

0.917
PPI
0.697
Metabolic

0.856
PPI
0.686
Metabolic

0.858
PPI
0.688
Metabolic

0.82
PPI
0.675
Metabolic

0.803
PPI
0.588
Metabolic

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
phnN PHNN_ECOLI Ribose 1,5-bisphosphate phosphokinase PhnN P16690 b4094 948608 15 of 231 00030, 01100

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
phnJ PHNJ_ECOLI Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase P16688 b4098 948606 3 of 41 00440, 01100
ydcS YDCS_ECOLI Bifunctional polyhydroxybutyrate synthase / ABC transporter periplasmic binding protein P76108 b1440 75171521 3 of 205 02024
napD NAPD_ECOLI Chaperone NapD P0A9I5 b2207 67416643 1 of 225
glaH GLAH_ECOLI Glutarate 2-hydroxylase P76621 b2659 948076 5 of 87 00310, 01100, 01120
ynfL YNFL_ECOLI Uncharacterized HTH-type transcriptional regulator YnfL P77559 b1595 946136 1 of 187
yibT YIBT_ECOLI Uncharacterized protein YibT Q2M7R5 b4554 1450299 5 of 65
prs KPRS_ECOLI Ribose-phosphate pyrophosphokinase P0A717 b1207 67417475 2 of 1151 00030, 00230, 01100, 01110, 01120, 01200, 01230
yhjY YHJY_ECOLI Uncharacterized protein YhjY P37663 b3548 948073 6 of 101
yfdC YFDC_ECOLI Inner membrane protein YfdC P37327 b2347 944801 2 of 34
ybiI YBII_ECOLI Uncharacterized protein YbiI P41039 b0803 75204918 6 of 101
yiaT YIAT_ECOLI Putative outer membrane protein YiaT P37681 b3584 948097 4 of 235
ybiO YBIO_ECOLI Moderate conductance mechanosensitive channel YbiO P75783 b0808 75170874 5 of 58
phnH PHNH_ECOLI Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH P16686 b4100 948619 3 of 20 00440, 01100
phnL PHNL_ECOLI Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL P16679 b4096 948612 4 of 153 00440, 01100
dgoK DGOK_ECOLI 2-dehydro-3-deoxygalactonokinase P31459 b3693 948207 5 of 127 00052, 01100

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