Species:

Escherichia coli (strain K12) (83333)

Expansion Algorithm: Genes as group

Link/Direction min confidence: 0.5/1.0

Genes/Links: 16/111

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Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.951
Operon
0.851
Metabolic

0.972
Operon
0.872
Metabolic

0.902
Operon
0.849
Metabolic

0.922
Operon
0.872
Metabolic

0.918
Operon
0.886
Metabolic

0.964
Operon
0.844
Metabolic

0.912
Operon
0.815
Metabolic

0.834
Operon
0.741
Metabolic

0.954
PPI
0.937
Metabolic

0.905
Operon
0.874
Metabolic

0.92
Operon
0.866
Metabolic

0.753
PPI
0.725
Metabolic

0.873
Operon
0.85
Metabolic

0.928
Operon
0.889
Metabolic

0.799
Metabolic
0.779
Operon

Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.993
Operon
0.962
Metabolic

0.97
Metabolic
0.966
PPI

0.975
PPI
0.96
Metabolic

0.982
Metabolic
0.976
PPI

0.936
Operon
0.681
Metabolic

0.884
Metabolic
0.519
Operon

0.95
Metabolic
0.913
Operon

0.799
Metabolic
0.779
Operon

0.94
Operon
0.887
Metabolic

0.922
PPI
0.896
Metabolic

0.92
Metabolic
0.902
Operon

0.898
Metabolic
0.78
Operon

0.945
Metabolic
0.903
Operon

0.942
PPI
0.931
Operon

0.757
PPI
0.724
Metabolic

0.753
PPI
0.725
Metabolic

0.85
Metabolic
0.82
PPI

0.846
Metabolic
0.53
Operon

0.697
Metabolic
0.575
PPI

0.704
Metabolic
0.519
Operon

0.993
Operon
0.958
Metabolic

0.988
Operon
0.947
Metabolic

0.971
Operon
0.861
Metabolic

0.839
Metabolic
0.836
Operon

0.987
Operon
0.929
Metabolic

0.921
Operon
0.85
Metabolic

0.948
Operon
0.897
Metabolic

0.92
Operon
0.833
Metabolic

0.873
Operon
0.85
Metabolic

0.962
Operon
0.757
Metabolic

0.844
Operon
0.836
Metabolic

0.947
PPI
0.922
Metabolic

0.922
Metabolic
0.672
Operon

0.945
Metabolic
0.903
Operon

0.963
Operon
0.911
Metabolic

0.957
Operon
0.933
Metabolic

0.968
Operon
0.924
Metabolic

0.991
Operon
0.927
Metabolic

0.988
Operon
0.947
Metabolic

0.981
Operon
0.934
Metabolic

0.984
PPI
0.928
Metabolic

0.909
Metabolic
0.584
Operon

0.951
Operon
0.928
Metabolic

0.928
Operon
0.767
Metabolic

0.92
Operon
0.866
Metabolic

0.884
Metabolic
0.519
Operon

0.891
Metabolic
0.758
Operon

0.974
PPI
0.876
Metabolic

0.994
Operon
0.991
Metabolic

0.996
Metabolic
0.994
Operon
0.95
Complex

0.991
Operon
0.988
Metabolic

0.991
Operon
0.957
Metabolic

0.968
Operon
0.924
Metabolic

0.982
Operon
0.949
Metabolic

0.989
Operon
0.986
Metabolic

0.918
Operon
0.886
Metabolic

0.93
Operon
0.902
Metabolic

0.98
PPI
0.833
Metabolic

0.92
Operon
0.833
Metabolic

0.95
Metabolic
0.913
Operon

0.976
Metabolic
0.945
Operon

0.918
Operon
0.856
Metabolic

0.993
Operon
0.962
Metabolic

0.994
Operon
0.994
Metabolic

0.952
Metabolic
0.928
Operon

0.988
PPI
0.958
Metabolic

0.977
PPI
0.899
Metabolic

0.93
Operon
0.902
Metabolic

0.912
Operon
0.815
Metabolic

0.97
PPI
0.894
Metabolic

0.891
Metabolic
0.758
Operon

0.923
Operon
0.767
Metabolic

0.947
PPI
0.922
Metabolic

0.846
Metabolic
0.53
Operon

0.92
Operon
0.913
Metabolic

0.967
Operon
0.893
Metabolic

0.916
Operon
0.913
Metabolic

0.993
Operon
0.964
Metabolic

0.994
Operon
0.975
Metabolic

0.988
Operon
0.961
Metabolic

0.989
Operon
0.986
Metabolic

0.965
Operon
0.893
Metabolic

0.978
Operon
0.969
Metabolic

0.984
PPI
0.928
Metabolic

0.965
Metabolic
0.734
Operon

0.964
Operon
0.844
Metabolic

0.97
PPI
0.894
Metabolic

0.962
Operon
0.757
Metabolic

0.956
Operon
0.855
Metabolic

0.922
PPI
0.896
Metabolic

0.963
Metabolic
0.799
Operon

0.697
Metabolic
0.575
PPI

0.993
Metabolic
0.992
Operon
0.95
Complex

0.996
Metabolic
0.994
Operon
0.95
Complex

0.995
Metabolic
0.994
Operon
0.95
Complex

0.991
Operon
0.962
Metabolic

0.963
Operon
0.911
Metabolic

0.988
Operon
0.961
Metabolic

0.974
Operon
0.971
Metabolic

0.902
Operon
0.849
Metabolic

0.975
PPI
0.96
Metabolic

0.984
PPI
0.811
Metabolic

0.976
PPI
0.975
Operon

0.902
Operon
0.811
Metabolic

0.844
Operon
0.836
Metabolic

0.916
Operon
0.913
Metabolic

1.0
Metabolic
1.0
PPI
1.0
Complex

0.994
Operon
0.991
Metabolic

0.995
Metabolic
0.994
Operon
0.95
Complex

0.992
Operon
0.972
Metabolic

0.993
Operon
0.921
Metabolic

0.991
Operon
0.985
Metabolic

0.948
Operon
0.897
Metabolic

0.93
Operon
0.848
Metabolic

0.951
Operon
0.928
Metabolic

0.961
PPI
0.88
Operon

0.905
Operon
0.874
Metabolic

0.967
Operon
0.893
Metabolic

0.963
Metabolic
0.799
Operon

0.92
Metabolic
0.902
Operon

0.993
Operon
0.969
Metabolic

0.991
Operon
0.984
Metabolic

0.991
Operon
0.957
Metabolic

0.993
Operon
0.964
Metabolic

0.991
Operon
0.927
Metabolic

0.993
Operon
0.958
Metabolic

0.994
Operon
0.994
Metabolic

0.974
Operon
0.971
Metabolic

0.991
Operon
0.985
Metabolic

0.972
Operon
0.872
Metabolic

0.97
Metabolic
0.966
PPI

0.977
PPI
0.826
Metabolic

0.975
Operon
0.833
Metabolic

0.958
Metabolic
0.917
Operon

0.704
Metabolic
0.519
Operon

0.954
Operon
0.823
Metabolic

0.965
Operon
0.893
Metabolic

0.921
Operon
0.85
Metabolic

0.93
Operon
0.848
Metabolic

0.975
Operon
0.833
Metabolic

0.936
Operon
0.681
Metabolic

0.942
Operon
0.776
Metabolic

0.757
PPI
0.724
Metabolic

0.902
Operon
0.811
Metabolic

0.963
PPI
0.918
Metabolic

0.928
Operon
0.767
Metabolic

0.928
Operon
0.889
Metabolic

0.918
Operon
0.856
Metabolic

0.923
Operon
0.767
Metabolic

0.8
Metabolic
0.783
Operon

1.0
Metabolic
1.0
PPI
1.0
Complex

0.993
Metabolic
0.992
Operon
0.95
Complex

0.991
Operon
0.988
Metabolic

0.991
Operon
0.984
Metabolic

0.99
Operon
0.96
Metabolic

0.957
Operon
0.933
Metabolic

0.952
Metabolic
0.928
Operon

0.951
Operon
0.851
Metabolic

0.954
Operon
0.823
Metabolic

0.839
Metabolic
0.836
Operon

0.978
Operon
0.969
Metabolic

0.967
Metabolic
0.845
Operon

0.982
Metabolic
0.976
PPI

0.762
Operon
0.674
Metabolic

0.993
Operon
0.969
Metabolic

0.991
Operon
0.962
Metabolic

0.99
Operon
0.96
Metabolic

0.994
Operon
0.975
Metabolic

0.982
Operon
0.949
Metabolic

0.992
Operon
0.972
Metabolic

0.981
Operon
0.934
Metabolic

0.971
Operon
0.861
Metabolic

0.988
PPI
0.958
Metabolic

0.942
Operon
0.776
Metabolic

0.922
Operon
0.872
Metabolic

0.962
PPI
0.715
Metabolic

0.85
Metabolic
0.82
PPI

0.928
Metabolic
0.519
Operon

0.898
Metabolic
0.78
Operon

0.993
Operon
0.921
Metabolic

0.987
Operon
0.929
Metabolic

0.977
PPI
0.826
Metabolic

0.977
PPI
0.899
Metabolic

0.984
PPI
0.811
Metabolic

0.98
PPI
0.833
Metabolic

0.762
Operon
0.674
Metabolic

0.834
Operon
0.741
Metabolic

0.974
PPI
0.876
Metabolic

0.956
Operon
0.855
Metabolic

0.8
Metabolic
0.783
Operon

0.962
PPI
0.715
Metabolic

0.882
Metabolic
0.519
Operon

0.94
Operon
0.887
Metabolic

0.909
Metabolic
0.584
Operon

0.967
Metabolic
0.845
Operon

0.976
PPI
0.975
Operon

0.961
PPI
0.88
Operon

0.965
Metabolic
0.734
Operon

0.958
Metabolic
0.917
Operon

0.963
PPI
0.918
Metabolic

0.954
PPI
0.937
Metabolic

0.976
Metabolic
0.945
Operon

0.882
Metabolic
0.519
Operon

0.922
Metabolic
0.672
Operon

0.92
Operon
0.913
Metabolic

0.928
Metabolic
0.519
Operon

0.942
PPI
0.931
Operon

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
rihC RIHC_ECOLI Non-specific ribonucleoside hydrolase RihC P22564 b0030 75169929 15 of 538 00240, 01100, 01232

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
ychF YCHF_ECOLI Ribosome-binding ATPase YchF P0ABU2 b1203 66674977 14 of 859
lldD LLDD_ECOLI L-lactate dehydrogenase P33232 b3605 67417608 6 of 492 00620, 01100
tmk KTHY_ECOLI Thymidylate kinase P0A720 b1098 66670636 14 of 768 00240, 01100, 01232
nadK NADK_ECOLI NAD kinase P0A7B3 b2615 67414068 14 of 810 00760, 01100, 01240
sucA ODO1_ECOLI 2-oxoglutarate dehydrogenase E1 component P0AFG3 b0726 66671005 14 of 765 00020, 00785, 01100, 01110, 01120, 01200
alaS SYA_ECOLI Alanine--tRNA ligase P00957 b2697 947175 15 of 916 00970
cysJ CYSJ_ECOLI Sulfite reductase [NADPH] flavoprotein alpha-component P38038 b2764 947239 15 of 642 00920, 01100, 01120
sucB ODO2_ECOLI Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex P0AFG6 b0727 58460903 14 of 919 00020, 00310, 00380, 00785, 01100, 01110, 01120, 01200
sucD SUCD_ECOLI Succinate--CoA ligase [ADP-forming] subunit alpha P0AGE9 b0729 67413769 14 of 850 00020, 00640, 00660, 01100, 01110, 01120, 01200
metG SYM_ECOLI Methionine--tRNA ligase P00959 b2114 946643 15 of 892 00450, 00970, 01100
rihA RIHA_ECOLI Pyrimidine-specific ribonucleoside hydrolase RihA P41409 b0651 945503 15 of 611 00240, 01100, 01232
sucC SUCC_ECOLI Succinate--CoA ligase [ADP-forming] subunit beta P0A836 b0728 66671003 14 of 858 00020, 00640, 00660, 01100, 01110, 01120, 01200
acs ACSA_ECOLI Acetyl-coenzyme A synthetase P27550 b4069 66672015 15 of 830 00010, 00620, 00630, 00640, 00680, 01100, 01110, 01120, 01200
pepP AMPP_ECOLI Xaa-Pro aminopeptidase P15034 b2908 947385 14 of 593
gpmA GPMA_ECOLI 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase P62707 b0755 67413794 14 of 718 00010, 00260, 00680, 01100, 01110, 01120, 01200, 01230

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