Species:

Escherichia coli (strain K12) (83333)

Expansion Algorithm: Genes as group

Link/Direction min confidence: 0.5/1.0

Genes/Links: 16/36

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Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.962
PPI
0.856
Metabolic

0.897
Operon
0.838
Metabolic

0.841
Operon
0.807
Metabolic

0.588
Metabolic
0.506
PPI

0.84
Metabolic
0.818
Operon

0.559
Metabolic
0.5
PPI

0.754
Metabolic
0.738
Operon

0.783
Metabolic
0.685
Operon

0.783
Metabolic
0.685
Operon

0.749
Metabolic
0.727
Operon

0.782
Operon
0.663
Metabolic

0.781
Metabolic
0.693
Operon

0.747
Operon
0.731
Metabolic

0.776
Metabolic
0.67
Operon

0.742
Metabolic
0.715
Operon

Interaction partners
Confidence
Network
Evidence type
DOM
GIN
GRG
MEX
MIR
PEX
PHP
PIN
SCL
TFB
Species
ATH
BSU
BTA
CEL
CLU
CIN
DME
DDI
DRE
ECO
GGA
HSA
MJA
MMU
MTU
OSA
PFA
RNO
SCE
SPO
SSC
SSO
GS

0.782
Operon
0.663
Metabolic

0.542
Metabolic
0.5
PPI

0.559
Metabolic
0.5
PPI

0.542
Metabolic
0.5
PPI

0.754
Metabolic
0.738
Operon

0.588
Metabolic
0.506
PPI

0.677
Metabolic
0.59
PPI

0.542
Metabolic
0.5
PPI

0.925
Operon
0.889
Metabolic

0.821
Operon
0.819
Metabolic

0.808
Operon
0.795
Metabolic

0.828
Operon
0.82
Metabolic

0.84
Metabolic
0.818
Operon

0.819
Metabolic
0.717
Operon

0.677
Metabolic
0.59
PPI

0.799
Metabolic
0.519
Operon

0.775
Metabolic
0.673
Operon

0.775
Metabolic
0.673
Operon

0.785
Metabolic
0.664
Operon

0.776
Metabolic
0.67
Operon

0.847
PPI
0.834
Metabolic
0.752
Operon

0.847
PPI
0.834
Metabolic
0.752
Operon

0.868
Metabolic
0.861
Operon

0.9
Metabolic
0.9
Signaling
0.897
Operon

0.876
Metabolic
0.86
Operon

0.821
Operon
0.819
Metabolic

0.783
Metabolic
0.685
Operon

0.847
PPI
0.834
Metabolic
0.752
Operon

0.949
Operon
0.892
Metabolic

0.841
Operon
0.807
Metabolic

0.868
Metabolic
0.861
Operon

0.9
Metabolic
0.9
Signaling
0.897
Operon

0.876
Metabolic
0.86
Operon

0.819
Metabolic
0.717
Operon

0.783
Metabolic
0.685
Operon

0.847
PPI
0.834
Metabolic
0.752
Operon

0.962
PPI
0.856
Metabolic

0.949
Operon
0.892
Metabolic

0.897
Operon
0.838
Metabolic

0.828
Operon
0.82
Metabolic

0.802
Operon
0.729
Metabolic

0.749
Metabolic
0.727
Operon

0.876
Metabolic
0.86
Operon

0.876
Metabolic
0.86
Operon

0.851
Metabolic
0.588
Operon

0.802
Operon
0.729
Metabolic

0.799
Metabolic
0.519
Operon

0.781
Metabolic
0.693
Operon

0.925
Operon
0.889
Metabolic

0.747
Operon
0.731
Metabolic

0.868
Metabolic
0.861
Operon

0.868
Metabolic
0.861
Operon

0.808
Operon
0.795
Metabolic

0.851
Metabolic
0.588
Operon

0.542
Metabolic
0.5
PPI

0.785
Metabolic
0.664
Operon

0.742
Metabolic
0.715
Operon

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
ydhX YDHX_ECOLI Uncharacterized ferredoxin-like protein YdhX P77375 b1671 66674436 15 of 26

Gene symbol Description UniProt ID Ensembl ID NCBI ID Node degree KEGG pathways Node color
nfrA NFRA_ECOLI Bacteriophage adsorption protein A P31600 b0568 944741 2 of 88
hycG HYCG_ECOLI Formate hydrogenlyase subunit 7 P16433 b2719 947191 2 of 67
hybA HYBA_ECOLI Hydrogenase-2 operon protein HybA P0AAJ8 b2996 66673106 1 of 61
cmk KCY_ECOLI Cytidylate kinase P0A6I0 b0910 66670814 3 of 481 00240, 01100, 01232
dacC DACC_ECOLI D-alanyl-D-alanine carboxypeptidase DacC P08506 b0839 945455 9 of 409 00550, 01100
ddpA DDPA_ECOLI Probable D,D-dipeptide-binding periplasmic protein DdpA P76128 b1487 946052 5 of 158 02024
livK LIVK_ECOLI Leucine-specific-binding protein P04816 b3458 66672660 6 of 404 02010, 02024
nrfD NRFD_ECOLI Protein NrfD P32709 b4073 66672011 2 of 96
livJ LIVJ_ECOLI Leu/Ile/Val-binding protein P0AD96 b3460 66672656 6 of 374 02010, 02024
ycbZ LONH_ECOLI Putative Lon protease homolog P75867 b0955 945569 1 of 7
nrfC NRFC_ECOLI Protein NrfC P0AAK7 b4072 67414711 2 of 70
glcF GLCF_ECOLI Glycolate oxidase iron-sulfur subunit P52074 b4467 2847717 3 of 177 00630, 01100, 01110, 01120
modA MODA_ECOLI Molybdate-binding protein ModA P37329 b0763 945364 6 of 386 02010
ynaI YNAI_ECOLI Low conductance mechanosensitive channel YnaI P0AEB5 b1330 66674841 2 of 299
btuF BTUF_ECOLI Vitamin B12-binding protein P37028 b0158 66671552 7 of 395 02010

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